Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908598.1_cds_XP_016458752.1_52347
CDS Infomation

[gene=LOC107782384] [db_xref=GeneID:107782384] [protein=reticulon-like protein B21 isoform X3] [protein_id=XP_016458752.1] [location=join(42553..43540,43619..43669,44035..44137,44225..44299,44519..44666,44789..44858,45848..45913,46340..46462,47245..47249)] [gbkey=CDS]
Sequence

ATGGAAGTAGACAATAGAAGAAAGAGCACATCATCAAGAAATAATGGTAGTGTTGTGGCA
TCAGGTTCTGTTTGGGAAAACAGAATGAAACTTGATGAAGTAAAAGGTGGAATTAAAGTA
CTTATTAGTAACAGTTCTGAAGAAACCCCAGATGAAAATGATGATAAAAATTGCACCTTT
TTTACTCAAGTGGATAAAAAGTTGGAAATAGAGCCAAAAAAATGCAATCTTGGTGTTGTT
GGGGTTATGAGTGGGAAGAGAAAAACTTGGAAAGCTGAAAACTTTGAAGGAAACCCAATT
CAGATTGCTAGTAAAAGACCTGATTTGAGCAAAAAATTGGATGAAAAGTGTCAAGATTTG
AGCAAAATCCCAAGTCAGAGCATGAAAAAATCTGAGTCTCTTAATGGGAAAGCAAAAGTA
GTATCAAGTAAGGAACTTGATGAGGAAAGCAAGCATCTTCATTTTAAAATCTTGAAAAAA
TCCAATCTTGAGGAGTCGAGTAAGAATATTGAAGGATCAATTAAGGAAAACGAGAACAAA
CCAAGTGGGATTAAGAAGACAAAATCTGAGGAAAATTGTGAAGAGAAATTCATCACAAGC
AATGCGGTGAACTTGAATTATGGTGAGGAGGTTTCGTCCGCTATTTTGGACAGACAGGTT
CGGAAGTTAAGGTCGAAGGAGATCACTTCTGAGGCTAAATTTGCAACTAAAGTAGATAAA
AATCTTGAAAATGAAGAGGAAGAAGAAGAAGAAGAAGAATGGGATGAGGTATTAGAGGAA
GAAATTGATGAGGAAATGGAAAAGAAAAGTGTTGATGTTAAACAAATTAAAGTACAAGTA
CAGAAGCCTAAAAAGATTGTGACTGAAGATAAGAAACTTCAGTATAGTAATAAAAAACAA
ATATCAATTTCTTCAGTTAACAAGAAACAGCCCCCTCCTACTTCAAACCATGCCAAAATT
CATCTAAGCCAAACAAGAACCAAATCAGTTCCAGTTTCAGATGTAAATCCTAGACAAAAT
GGCAAATTACAAAGCTTTGTTGACTTAGTGATGTGGAGAAATGTATCAAAATCCACATTA
ATCTTTGGAATTGGAACCTTTGCTATTATTTCATCTTCATATACTCAAGATCTCAATATC
AGCTTCATTGCTGTGCTTTCCTACTTGGGTCTGGTCTATCTTGCTGCAATCTTTCTCTTT
AGATCCCTCATTCACAGGAGAGCAAATGATATTGGTGAATCAAGTGAGTATGTAGTAGGG
GAAGAAGAAGCAGTGTGGGCACTGAAGTTGATACTTCCTTTCATAAATGAGTTTCTTTTG
AAAATCAGAGCCCTTTTTTCCGGTGATCCTGCAACTACAATGAAGATGGCAGTTCTGCTG
TTTCTTTTGGCTCGGTATGGCAGCTCCATAACCATTTGGAAACTGTCCAAATTAGGCTTT
TTTGGAGTCATGGTCATACCAAAAATTTGCTCTTCTTATTCCACACAGTTAACCTCTTAC
GGTACATTTTTGACACGATACGTTAGAGATGCTTGGGAATCATGTAGTCACAAAAAAGCA
GTTGGATTTGCAATCTTCACATTAGTTTGGAATTTCTCTTCAATCATTGCCAGAATATGG
GCAGATTGA

Peptide Sequence

PEP ID

XP_016458752.1
PEP Infomation

PREDICTED: reticulon-like protein B21 isoform X3 [Nicotiana tabacum]
Sequence

MEVDNRRKSTSSRNNGSVVASGSVWENRMKLDEVKGGIKVLISNSSEETPDENDDKNCTF
FTQVDKKLEIEPKKCNLGVVGVMSGKRKTWKAENFEGNPIQIASKRPDLSKKLDEKCQDL
SKIPSQSMKKSESLNGKAKVVSSKELDEESKHLHFKILKKSNLEESSKNIEGSIKENENK
PSGIKKTKSEENCEEKFITSNAVNLNYGEEVSSAILDRQVRKLRSKEITSEAKFATKVDK
NLENEEEEEEEEEWDEVLEEEIDEEMEKKSVDVKQIKVQVQKPKKIVTEDKKLQYSNKKQ
ISISSVNKKQPPPTSNHAKIHLSQTRTKSVPVSDVNPRQNGKLQSFVDLVMWRNVSKSTL
IFGIGTFAIISSSYTQDLNISFIAVLSYLGLVYLAAIFLFRSLIHRRANDIGESSEYVVG
EEEAVWALKLILPFINEFLLKIRALFSGDPATTMKMAVLLFLLARYGSSITIWKLSKLGF
FGVMVIPKICSSYSTQLTSYGTFLTRYVRDAWESCSHKKAVGFAIFTLVWNFSSIIARIW
AD

Transcript Sequence

Gene sequence data has not been registered.